Insertion junction: LMJ.RY0402.201456_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.201456
Chromosome:chromosome 8
Location:2531380
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g372250 YDIF1,YDIF Putative soluble chloroplast ABCF protein, related to bacterial YdiF.; (1 of 1) PTHR19211//PTHR19211:SF48 - ATP-BINDING TRANSPORT PROTEIN-RELATED // ABC TRANSPORTER F FAMILY MEMBER 2-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTTGCCACTTCACACCAAAAGGCAGTC
Internal bar code:GAGCATTCACAGCAATCGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:99.7636
LEAP-Seq n confirming:2532
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGAGCAGCGAGTATTCA
Suggested primer 2:GCGTTACGACTTGGAATGGT