Insertion junction: LMJ.RY0402.201474_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.201474
Chromosome:chromosome 16
Location:4834006
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g686200 TSPSP2,TPT1,TPS3,TSSP2 (1 of 2) K16055 - trehalose 6-phosphate synthase/phosphatase (TPS); Triose-phosphTrehalose-6-phosphate synthase/phosphataseate transporter, class II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGGCTCGGCTTGGAGTTCCCCTTTTT
Internal bar code:AAAACCGGTGGAATGAAAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:99.5822
LEAP-Seq n confirming:3337
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACCACAACCACCAGAG
Suggested primer 2:CTGCACATTCTGCAAGAGGA