Insertion junction: LMJ.RY0402.201511_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.201511
Chromosome:chromosome 17
Location:1757474
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g709000 (1 of 1) PTHR11319//PTHR11319:SF35 - G PROTEIN-COUPLED RECEPTOR-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGGGATAAGTGCAGGATTAGGAGGAG
Internal bar code:GGATGGCGAGGCAGGATGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:821
LEAP-Seq percent confirming:81.1756
LEAP-Seq n confirming:15343
LEAP-Seq n nonconfirming:3558
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AACGACATGCTGCTCATCTG
Suggested primer 2:TCGACACTTTTTCCCCTCTG