Insertion junction: LMJ.RY0402.201580_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.201580
Chromosome:chromosome 1
Location:4558922
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g031050 (1 of 1) K15172 - transcription elongation factor SPT5 (SUPT5H, SPT5) 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTCTGTGTGCCCTACCCCCATGCTAGC
Internal bar code:CAATCCCTATCCTAACGGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:916
LEAP-Seq percent confirming:98.9311
LEAP-Seq n confirming:2499
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTCCATGATATCCCAAA
Suggested primer 2:TGCCAAGCTTACCTCGACTT