Insertion junction: LMJ.RY0402.201597_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.201597
Chromosome:chromosome 11
Location:331493
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467568 (1 of 1) K06276 - 3-phosphoinositide dependent protein kinase-1 (PDPK1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTGCCGCGTTGGAATCCGGGGGGAAAC
Internal bar code:TAGTCCCAGCGAGCTGGCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:945
LEAP-Seq percent confirming:99.5935
LEAP-Seq n confirming:1225
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACACAGCAACAGCAACAGC
Suggested primer 2:ACCCTCCTTGTCCTGGATCT