Insertion junction: LMJ.RY0402.201652_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.201652
Chromosome:chromosome 1
Location:1764226
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g009500 CDPK3,CDPK5 Calcium/calmodulin-dependent protein kinase; (1 of 2) PF00069//PF13499 - Protein kinase domain (Pkinase) // EF-hand domain pair (EF-hand_7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACGACGCCCAACCGGCAGCCTACAATC
Internal bar code:GTATCGTGTACTTCGTTCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:398
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCGACATCGCAAATGG
Suggested primer 2:GGCCAGTATAGGTGACCGAA