Insertion junction: LMJ.RY0402.201666_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.201666
Chromosome:chromosome 6
Location:3976822
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278194 FAP236 (1 of 3) PF05217 - STOP protein (STOP); Flagellar Associated Protein 236 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGAGGTGTGCGGCGGGGGGCTGGGCGG
Internal bar code:CGAGTAACGGTCCCGCGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:851
LEAP-Seq percent confirming:91.4498
LEAP-Seq n confirming:1476
LEAP-Seq n nonconfirming:138
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AATAGCACCTGTCCACCCTG
Suggested primer 2:GCAACAGCTCTCGGATTAGG