Insertion junction: LMJ.RY0402.201747_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.201747
Chromosome:chromosome 6
Location:8222571
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g305650 PAO6,Tic55-like4,TIC55-4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCGGATGGGTGGCAATGTGCGGGATG
Internal bar code:TTTCGCACTCCCGCATAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:98.5887
LEAP-Seq n confirming:489
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGACACGAAGAGAGCC
Suggested primer 2:AATGTAGCCATGCGGAAGTC