Insertion junction: LMJ.RY0402.201981_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.201981
Chromosome:chromosome 7
Location:3240976
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g334150 (1 of 1) PTHR23097//PTHR23097:SF124 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCGCACCCGTTTCCTGGTCACCGGCCA
Internal bar code:CACCGTATGATTTTGCATACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:99.3111
LEAP-Seq n confirming:3748
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCAGAGGTGTTGACTGG
Suggested primer 2:ACTTCCGTACCTGATGGCAC