Insertion junction: LMJ.RY0402.202016_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.202016
Chromosome:chromosome 3
Location:9039960
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g210401 (1 of 1) PTHR14614//PTHR14614:SF15 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCATGCGTCCCAAATCCCGCCCACTAA
Internal bar code:GCGTGAAGTTGGTAAAGTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:610
LEAP-Seq percent confirming:48.2677
LEAP-Seq n confirming:4291
LEAP-Seq n nonconfirming:4599
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTCATGAGGGTGCAGAG
Suggested primer 2:CCACAAACTAACCCCCACAC