Insertion junction: LMJ.RY0402.202056_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.202056
Chromosome:chromosome 16
Location:285491
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCCTGCTGCTGCCCCTGCCCTTGCTG
Internal bar code:AACCGCCATGTGGTCAGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:93.7322
LEAP-Seq n confirming:329
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACTAAACCGAACCCAA
Suggested primer 2:CCGTGTGTGTGTGTGTGTGT