Insertion junction: LMJ.RY0402.202554_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.202554
Chromosome:chromosome 3
Location:213132
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g144324 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCCCCGAAGGGCATTTGCTTGCCAGTG
Internal bar code:GGTGGATAGCGCGCGTGCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:99.5512
LEAP-Seq n confirming:1109
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATTCTGCGTTACAAGCG
Suggested primer 2:GTGTGATTGATGCAAGGACG