Insertion junction: LMJ.RY0402.202584_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.202584
Chromosome:chromosome 16
Location:5057204
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g684350 HAR1 (1 of 2) IPR006115//IPR008927//IPR029154 - 6-phosphogluconate dehydrogenase, NADP-binding // 6-phosphogluconate dehydrogenase C-terminal domain-like // 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain; Possible 3-hydroxyacid dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAACGCAGCTTATCATTTGGAAATTTGC
Internal bar code:ATGAAAGTAGAGGGGCCATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:636
LEAP-Seq percent confirming:99.8808
LEAP-Seq n confirming:2514
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATACGCGCTTAGCACA
Suggested primer 2:TTAGCCAGCGACATCAACTG