Insertion junction: LMJ.RY0402.202815_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.202815
Chromosome:chromosome 5
Location:247472
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGGGTGTTGGGGGGG
Internal bar code:AATGGCACTGCGTGCTTCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:96.8421
LEAP-Seq n confirming:184
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTTGTCCACCCCTAAT
Suggested primer 2:GAAGGCAGGAGACTGAGTGG