Insertion junction: LMJ.RY0402.202943_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.202943
Chromosome:chromosome 9
Location:3651389
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGGCGCGCAGTCTTGTTCGGCTAGTCC
Internal bar code:CCACTGTCGCATTGGGGTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:99.6667
LEAP-Seq n confirming:2392
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCGGTGAGAGAGAGAGA
Suggested primer 2:GGCATTTTTGCCTTCTACCA