Insertion junction: LMJ.RY0402.203222_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.203222
Chromosome:chromosome 5
Location:2610020
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTCTGGTCGCCGCCATTGGACCCCTGTC
Internal bar code:GGGTCCGCCTCCCGTCTGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:80.0635
LEAP-Seq n confirming:2016
LEAP-Seq n nonconfirming:502
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGATTGCACATACCTTGGGC
Suggested primer 2:GACACATCCTGGACATGCAC