Insertion junction: LMJ.RY0402.203484_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.203484
Chromosome:chromosome 13
Location:2715984
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g582270 FFT3 putative fructan fructosyltransferase; (1 of 1) IPR001362//IPR013148//IPR023296 - Glycoside hydrolase, family 32 // Glycosyl hydrolase family 32, N-terminal // Glycosyl hydrolase, five-bladed beta-propellor domain 5'UTR|CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGGAGGCTGAGGCGGCTCCGACGGGTG
Internal bar code:GGCCCTATCGACCTCGCTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:99.6364
LEAP-Seq n confirming:274
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATTACGTACGCCCTCAG
Suggested primer 2:CCGTGTGTGTGTGTGTGTGT