Insertion junction: LMJ.RY0402.203621_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.203621
Chromosome:chromosome 9
Location:4971255
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397919 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCTGCCTCGCTCGGTTCTTTGAGCGCGC
Internal bar code:ACCAGGACGCCTCCCGACGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:99.4543
LEAP-Seq n confirming:3645
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGAGGCAGTAGCGGTGC
Suggested primer 2:TGACAACATTGTGCCCTTGT