Insertion junction: LMJ.RY0402.203675_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.203675
Chromosome:chromosome 1
Location:2636724
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g015350 POR1,POR Light-dependent protochlorophyllide reductase; (1 of 1) K00218 - protochlorophyllide reductase (E1.3.1.33, por) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCGTGGGCGCGTGCTGGGGCTCGGGGA
Internal bar code:GGGATCCTTGTGACCGCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:99.1863
LEAP-Seq n confirming:1097
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACACTGCGGACAATCCT
Suggested primer 2:ACTCAATCCTGCACCTGGAC