Insertion junction: LMJ.RY0402.203740_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.203740
Chromosome:chromosome 11
Location:564668
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCATCCGTGACAGCGTTTAGCACTGCTT
Internal bar code:TGCGAGGGAGCTCGCGAATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:911
LEAP-Seq percent confirming:93.9372
LEAP-Seq n confirming:1286
LEAP-Seq n nonconfirming:83
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCTCTTCCCCACAGGT
Suggested primer 2:TAGACACCAACCCACAGCAA