Insertion junction: LMJ.RY0402.203752_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.203752
Chromosome:chromosome 3
Location:8011874
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGGGCTTTCGTTTCGTTTTTTTTTTC
Internal bar code:GGAGAAAAAGGGGCACGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:27.2079
LEAP-Seq n confirming:801
LEAP-Seq n nonconfirming:2143
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAACGGTCAATGGTGATG
Suggested primer 2:ACGACCTACAGGTGTTTGGC