Insertion junction: LMJ.RY0402.203777_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.203777
Chromosome:chromosome 2
Location:2881964
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g094900 (1 of 1) PTHR23083//PTHR23083:SF427 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGGGGATTGTGCGGCGGACTTCAAGG
Internal bar code:CATAATATCGTGGCGTTCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:99.877
LEAP-Seq n confirming:812
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTCCCCTCTACCCAGTC
Suggested primer 2:GAAGCTTGGTGGAGCTATCG