Insertion junction: LMJ.RY0402.203970_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.203970
Chromosome:chromosome 7
Location:1583433
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g324800 SNE6 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Cinnamoyl-CoA reductase/flavanone 4-reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAAATGCCGCTGTTTGTGTCTCTGTGA
Internal bar code:AGGGAGATGGGGCGCCGGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:267
LEAP-Seq percent confirming:68.3476
LEAP-Seq n confirming:637
LEAP-Seq n nonconfirming:295
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATGTGCTTTTACCTGCC
Suggested primer 2:TATAGCTGATTGGCAGTGCG