Insertion junction: LMJ.RY0402.204741_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.204741
Chromosome:chromosome 17
Location:3694429
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTGCTCGCCCTGTGTGGCCGTGACGTC
Internal bar code:GACGCCGCCTTGAAGCGTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:99.7299
LEAP-Seq n confirming:2585
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCACTGTCATCGTCGTC
Suggested primer 2:TACCACCAGCACCAGTACCA