Insertion junction: LMJ.RY0402.204863_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.204863
Chromosome:chromosome 3
Location:1406899
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g151000 SEX4,DSP8 Laforin glucan phosphatase, chloroplastic; (1 of 1) PTHR10343//PTHR10343:SF58 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGAGAACACGCGGGACTGTGCCTGCG
Internal bar code:ACCGTGCCACACGCAACACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:530
LEAP-Seq percent confirming:99.5875
LEAP-Seq n confirming:2414
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTGTCGTCGAAGTCAAT
Suggested primer 2:CAGACTTCAAGGTGGGGAGA