Insertion junction: LMJ.RY0402.204924_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.204924
Chromosome:chromosome 11
Location:3693420
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g482700 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGTGCGGCTGTGGCGCAGTCTCCGCAT
Internal bar code:TGTGCGAAAGCTGACGGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:98.7854
LEAP-Seq n confirming:6669
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACTGAGGATGGAAAAGG
Suggested primer 2:ATAGGCACCCTGCACAAAAC