Insertion junction: LMJ.RY0402.205175_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.205175
Chromosome:chromosome 6
Location:3903432
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278181 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGATATGGACCCTTCTCTAGCACACGCC
Internal bar code:AGGATGTGAGGTTTGTGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:98.356
LEAP-Seq n confirming:2094
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAAGTGCTGAACCCCATC
Suggested primer 2:GACGGTCCTGACCTTCTTGA