Insertion junction: LMJ.RY0402.205493_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.205493
Chromosome:chromosome 3
Location:7544176
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g205150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTGTGTCATGCGTATGCGTCCCACGTG
Internal bar code:AACCAGGAGGCGAAAATGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:79.6385
LEAP-Seq n confirming:3833
LEAP-Seq n nonconfirming:980
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGCTGGAATTTGGCAAT
Suggested primer 2:TCCTCACACACCTGCTGTTC