Insertion junction: LMJ.RY0402.205555_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.205555
Chromosome:chromosome 17
Location:2696303
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g717900 PHC1 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGAGAGGGGTTGGGTTTGCCCTGGTG
Internal bar code:CGGGGCTCGTTCCTTTTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:99.3283
LEAP-Seq n confirming:3697
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCACCCTGAACGACTTC
Suggested primer 2:CGGAGTCTTTGTTGCAGTCA