Insertion junction: LMJ.RY0402.205584_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.205584
Chromosome:chromosome 17
Location:3289482
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g723100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTAGGAGTTGCGAGTTGTGCATTAAC
Internal bar code:GGTTCCATTACGTCAGGGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:97.6845
LEAP-Seq n confirming:1350
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCACTCTTCCACTTGCG
Suggested primer 2:GCGTGCTGACGTTAACAGAA