Insertion junction: LMJ.RY0402.205618_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.205618
Chromosome:chromosome 3
Location:7918291
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGCTGCGGCAGCTGCCTCTGCCTCCG
Internal bar code:GGGGGTCATACGGTCTGGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:72.155
LEAP-Seq n confirming:298
LEAP-Seq n nonconfirming:115
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTCATCCGAGCTACTG
Suggested primer 2:CTATGCCCTAAGAAGCACCG