Insertion junction: LMJ.RY0402.205704_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.205704
Chromosome:chromosome 4
Location:2283386
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g220350 ATPVA3 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGTGGCGGGGCCGTTGCGGTGCCGGTT
Internal bar code:TGCGATGTGCGGCCGGGTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGATGTGTAGGATTGGTG
Suggested primer 2:GTGAGGGAGGAATGTCCAGA