Insertion junction: LMJ.RY0402.205864_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.205864
Chromosome:chromosome 6
Location:5859400
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCCACCATCGCGCTGCTGCACATGTT
Internal bar code:AGATACGCCTTCCCCCCGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:55.8356
LEAP-Seq n confirming:1617
LEAP-Seq n nonconfirming:1279
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCGGCATTAAGGTTTT
Suggested primer 2:GCTCAAACTCCACTCGGAAG