Insertion junction: LMJ.RY0402.206160_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.206160
Chromosome:scaffold 19
Location:68415
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre19.g750547 NDA2 thylakoid NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGTGCTGCATGGGGAGGCACGTTTCT
Internal bar code:TGGGTAGTCTCTGCGAGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1007
LEAP-Seq percent confirming:98.702
LEAP-Seq n confirming:1901
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAACAGGTCGTGGACAT
Suggested primer 2:CTCCTGCTTCCTTGCGTATC