Insertion junction: LMJ.RY0402.206361_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.206361
Chromosome:chromosome 12
Location:2546851
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g505700 GTF5 (1 of 1) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp); TATA sequence-binding protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGAAAAAGTTTGCATCGCTTCACAAAG
Internal bar code:CACCAACGTCGACCGAGTCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:972
LEAP-Seq percent confirming:96.4526
LEAP-Seq n confirming:5601
LEAP-Seq n nonconfirming:206
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTCGAGGGTACAGCAAG
Suggested primer 2:GACAGGGTTTGCCAAGAGAG