Insertion junction: LMJ.RY0402.206448_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.206448
Chromosome:chromosome 3
Location:9046242
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACAGGAGACAGAGGAATGCATGAATCC
Internal bar code:CAGCGTTCAGTGGTGTGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1461
LEAP-Seq percent confirming:99.1725
LEAP-Seq n confirming:3236
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTCTCCCCGACTCTTG
Suggested primer 2:GGGCTCTGCTTTACGATCTG