Insertion junction: LMJ.RY0402.206585_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.206585
Chromosome:chromosome 3
Location:6648321
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g197050 HTV2 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCAATACATGAAGGTGCGGCAGCTCAC
Internal bar code:TGTCCCGACTAAATAGAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:99.4382
LEAP-Seq n confirming:4779
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAACCTGCGACATAGCTG
Suggested primer 2:ATGAGCAGCTCCGTTGTCTT