Insertion junction: LMJ.RY0402.207006_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.207006
Chromosome:chromosome 9
Location:4205429
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394251 PF16 Central pair associated protein; (1 of 1) PF00514//PF13513 - Armadillo/beta-catenin-like repeat (Arm) // HEAT-like repeat (HEAT_EZ) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGAGGCAGGTAACTAGCGAATCCAGC
Internal bar code:TCCACTCCGCTCACCATCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:906
LEAP-Seq percent confirming:99.0561
LEAP-Seq n confirming:1994
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGTGAGAATTTTGGGGA
Suggested primer 2:CACCTTACTTCTTAGCGCCG