Insertion junction: LMJ.RY0402.207049_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.207049
Chromosome:chromosome 3
Location:4581291
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g176900 (1 of 2) 2.1.1.282//2.5.1.114 - tRNA(Phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))- methyltransferase / tRNA-yW synthesizing enzyme-3 // tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase / tRNA-yW synthesizing enzyme-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACTTCCAGCCCCCAACCCCCAACCAC
Internal bar code:GACCCCCGCTGTTGCGAGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:19.2385
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:403
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAACCGCAACTGAAAACG
Suggested primer 2:AACAACAACAACCGTCACCA