Insertion junction: LMJ.RY0402.207062_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.207062
Chromosome:chromosome 4
Location:1850205
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g211600 snRK1,CKIN1,SNF1,SNRK1A (1 of 1) PTHR24343//PTHR24343:SF183 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTACCGACAACCCTCCCCCGCCCCCCT
Internal bar code:GGCGCCGGAGAGCCGTGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:98.9804
LEAP-Seq n confirming:1262
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAGCCCAAGTTAAACCG
Suggested primer 2:GATCTGCTGGAAGAAGTGGC