Insertion junction: LMJ.RY0402.207353_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.207353
Chromosome:chromosome 5
Location:639497
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g231100 (1 of 1) PF00023//PF12796//PF13637 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGGTTCAGCTTGTCCTGCCCTGCTGCA
Internal bar code:AACGAGATCCGTGTTCCTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:986
LEAP-Seq percent confirming:99.8323
LEAP-Seq n confirming:1786
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCAACAGATCCACCACC
Suggested primer 2:ACTGTGTGAGGAAGGGATGG