Insertion junction: LMJ.RY0402.207526_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.207526
Chromosome:chromosome 9
Location:5644315
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401145 (1 of 2) 3.1.4.12 - Sphingomyelin phosphodiesterase / Neutral sphingomyelinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCATGGTGTCACTTGCTGCTTGCTGAG
Internal bar code:CCTATCGGGCGCCTCCGGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:98.4045
LEAP-Seq n confirming:15049
LEAP-Seq n nonconfirming:244
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTCACGCAGCAATACCA
Suggested primer 2:AAGTCTGTTTCCGTGATGGG