Insertion junction: LMJ.RY0402.207604_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.207604
Chromosome:chromosome 12
Location:297623
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g485600 SNRK2M (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTTGTACCTCATACCTTGACAGCTCTC
Internal bar code:GCGTAAAGCTAGTGCGTCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:93.6108
LEAP-Seq n confirming:2901
LEAP-Seq n nonconfirming:198
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACATAGCCACACACGG
Suggested primer 2:CATGTTGTGACCCCACAGAG