Insertion junction: LMJ.RY0402.207660_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.207660
Chromosome:chromosome 4
Location:3491352
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g227900 PF20 WD-repeat protein of flagellum central pair; (1 of 6) IPR001680//IPR015943//IPR017986//IPR020472 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTTGCCTCCCCATCCGCCACAATCTCT
Internal bar code:GGGGCGCTGCCCCGCGGTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:90.1646
LEAP-Seq n confirming:2081
LEAP-Seq n nonconfirming:227
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTAAGGGGAAGAACGAT
Suggested primer 2:GGTCGTTTCTTGCGATTCAA