Insertion junction: LMJ.RY0402.207831_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.207831
Chromosome:chromosome 1
Location:2889140
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g017550 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTATGACGTTTGGTATCCGCACTTTAATG
Internal bar code:GCGCGTTAAACGCAGCCACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:98.7711
LEAP-Seq n confirming:1286
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCATGTGGAGTGCGTAT
Suggested primer 2:AAGTGGAGGAAGAAGGGGAG