Insertion junction: LMJ.RY0402.208077_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.208077
Chromosome:chromosome 17
Location:3809764
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g727801 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACGACATGATGCAGGGGATGGATGGG
Internal bar code:CGAGGTTGCGTTGCCGCCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:854
LEAP-Seq percent confirming:99.3396
LEAP-Seq n confirming:1805
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCTGACCTGACAACCT
Suggested primer 2:GACCTGTGGACGGAGTAGGA