Insertion junction: LMJ.RY0402.208177_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.208177
Chromosome:chromosome 5
Location:292950
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g233551 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGGATTGATGGGTCACTCGCCTCGCCT
Internal bar code:TGCTGCGTTAGCCGGGAGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:869
LEAP-Seq percent confirming:99.4908
LEAP-Seq n confirming:3126
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAATAAGGAGCGAGGTTG
Suggested primer 2:TACTGTATCGCTCCCTCGCT