Insertion junction: LMJ.RY0402.208189_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.208189
Chromosome:chromosome 3
Location:4055907
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g172500 PTO2,PTOX2 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAATTTGCACTGGTGCTGCAAGCTGCCG
Internal bar code:GTGCATCGTCCGTGGTCTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:842
LEAP-Seq percent confirming:99.6821
LEAP-Seq n confirming:9719
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGAACTCCTGAACCCAC
Suggested primer 2:AAGGCATCACAAATTCTCCG