Insertion junction: LMJ.RY0402.208387_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.208387
Chromosome:chromosome 9
Location:2022666
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGGCGGCTGCATGCACTGCGGTACAC
Internal bar code:AATCCACGTATAGACCCGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:98.4676
LEAP-Seq n confirming:4498
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATATGGAAAACGCACCA
Suggested primer 2:TTTGGGTACAACAGCCAACA