Insertion junction: LMJ.RY0402.208392_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.208392
Chromosome:chromosome 16
Location:555462
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTGTGCCTGCAACGGCAAGCTTTGGCT
Internal bar code:TCGGAGCGACATAGCACGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:556
LEAP-Seq percent confirming:51.8564
LEAP-Seq n confirming:838
LEAP-Seq n nonconfirming:778
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTCTGGTGGACCCTTGT
Suggested primer 2:TCAGCAGTGCTACCGAATTG